2018
- Galilee M and Alian A. Multimerization of HIV-1 integrase hinges on conserved SH3-docking platforms. 2018, bioRXiv
- Galilee M and Alian A. The structure of FIV reverse transcriptase and its implications for non-nucleoside inhibitor resistance. 2018, PLOS Pathogens, 14(1): e1006849.
2016
- Galilee M, Britan-Rosich E, Griner SL, Uysal S, Baumgartel V, Lamb DC, Kossiakoff AA, Kotler M, Stroud RM, Marx A, Alian A. The preserved HTH-docking cleft of HIV-1 integrase is functionally critical. 2016, Structure, 24: 1936-1946.
- Khwaja A*, Galilee M*, Marx A, and Alian A. Structure of FIV capsid C-terminal domain demonstrates lentiviral evasion of genetic fragility by coevolved substitutions. 2016, Sci. Rep. 6, 24957. *Equal contribution.
2015
- Marx A*, Galilee M*, Alian A. Zinc enhancement of cytidine deaminase activity highlights a potential allosteric role of loop-3 in regulating APOBEC3 enzymes. 2015, Sci. Rep. 5, 18191. *Equal contribution
- Marx A, Alian A. Rerouting Resistance: Escaping Restriction Using Alternative Cellular Pathways. 2015, Trends Microbiol. 23: 595-597.
- Marx A, Alian A. The Road Less Traveled: HIV’s use of alternative routes through cellular pathways. 2015, J Virol. 89: 5204-5212. (Cover Illustration)
- Alian A, Aqeilan RI. T538 phosphorylation, Pin-ing p63-Itch stability. 2015, Cell Cycle, 14: 469-470.
- Eliahoo E, Marx A, Manor H, and Alian A. A Novel Open-Barrel Structure of Octameric Translin Reveals a Potential RNA Entryway. 2015, J Mol Biol. 427: 756-762.
- Marx A, and Alian A. The First Crystal Structure of a dTTP Bound Deoxycytidylate Deaminase Validates and Details the Allosteric-Inhibitor Binding Site. 2015, J Biol Chem. 290: 682-690.
2014
- Galilee M, and Alian A. Identification of Phe187 as a Crucial Dimerization Determinant Facilitates Crystallization of a Monomeric Retroviral Integrase Core Domain. 2014, Structure, 22: 1512-1519.
- Czudnochowski N, Ashley GW, Santi DV, Alian A, Finer-Moore J, Stroud RM. The mechanism of pseudouridine synthases from a covalent complex with RNA, and alternate specificity for U2605 versus U2604 between close homologs. 2014, Nucleic Acids Res., 42: 2037-2048.
2012
- Wu S, Avila-Sakar A, Kim J, Booth DS, Greenberg CH, Rossi A, Liao M, Alian A, Griner SL, Juge N, Yu Y, Merge CM, Chaparro-Riggers J, Strop P, Tampé R, Edwards RH, Stroud RM, Craik CS, Cheng Y. Fabs enable high-resolution single particle cryoEM studies of small proteins. 2012, Structure, 20: 582-592.
- Zaidoun S, Alian A, and Aqeilan RI. WW domain-containing proteins: Retrospectives and the future. 2012, Front. Biosci., 17: 331-348.
Earlier
- Alian A, Griner SL, Chiang V, Tsiang M, Jones G, Birkus G, Geleziunas R, Leavitt AD, and Stroud RM. Catalytically-active complex of HIV-1 integrase with a viral DNA substrate binds anti-integrase drugs. 2009, PNAS, 106: 8192-8197.
- Alian A, Degiovanni A, Griner SL, Finer-Moore JS, and Stroud RM. Crystal structure of an RluF-RNA complex: a base-pair rearrangement is the key to selectivity of RluF for U2604 of the ribosome. 2009, J Mol Biol., 388: 785-800. (Cover figure of RNA Journal 06/2010)
- Alian A, Lee TT, Griner SL, Stroud RM, and Finer-Moore J. Structure of a TrmA-RNA complex: A consensus RNA fold contributes to substrate selectivity and catalysis in m5U methyltransferases. 2008, PNAS, 105: 6876-6881.
- He X, Alian A, and Ortiz de Montellano PR. Inhibition of the Mycobacterium tuberculosis enoyl acyl carrier protein reductase InhA by arylamides. 2007, Bioorg Med Chem., 15: 6649-6658
- Verras A, Alian A, and Ortiz de Montellano PR. Cytochrome P450 active site plasticity: attenuation of imidazole binding in cytochrome P450(cam) by an L244A mutation. 2006, Protein Eng Des Sel., 19: 491-496. (Cover figure)
- He X, Alian A, Stroud R, and Ortiz de Montellano PR. Pyrrolidine carboxamides as a novel class of inhibitors of enoyl acyl carrier protein reductase from Mycobacterium tuberculosis. 2006, J Med Chem., 49: 6308-6323.
- Puxeddu I, Alian A*, Piliponsky AM, Ribatti D, Panet A, Levi-Schaffer F. Human peripheral blood eosinophils induce angiogenesis. 2005, Int J Biochem Cell Biol., 37: 628-636. *Equal contribution
- Alian A, Eldor A, Falk H, Panet A. Viral mediated gene transfer to sprouting blood vessels during angiogenesis. 2002, J. Virol. Methods, 105: 1-11.
- Ashhab Y, Alian A, Polliack A, Panet A, Yehuda DB. Two splicing variants of a new inhibitor of apoptosis gene with different biological properties and tissue distribution pattern. 2001, FEBS Lett., 495: 56-60.
- Alian A, Sela-Donenfeld* D, Panet A, Eldor A. Avian hemangioma retrovirus induces cell proliferation via the envelope (env) gene. 2000, Virology, 276: 161-168. * Equal contribution
- Alian A, Altman A, Dambroff E, Heuer B. Genotypic difference in salinity and water stress tolerance of fresh market tomato cultivars. 2000, Plant Science, 152: 59-65.